If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 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'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 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'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 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'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 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'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ), 'gf_id' => 'HOM05D000492', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000492' ), 'data_identifier' => 'HOM05D000492', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000492', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1080', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p41310' => 'bna', 'A03p03590' => 'bna', 'A03p03600' => 'bna', 'A03p37300' => 'bna', 'A03p48850' => 'bna', 'A04p07030' => 'bna', 'A05p37530' => 'bna', 'A05p43590' => 'bna', 'A06p05550' => 'bna', 'A06p33320' => 'bna', 'A07p02440' => 'bna', 'A08p33580' => 'bna', 'A08p35080' => 'bna', 'A09p00860' => 'bna', 'A09p02660' => 'bna', 'A09p64500' => 'bna', 'Aa31LG10G7460' => 'aar', 'Aa31LG1G3540' => 'aar', 'Aa31LG2G9350' => 'aar', 'Aa31LG3G18460' => 'aar', 'Aa31LG3G5300' => 'aar', 'Aa31LG3G5310' => 'aar', 'Aa31LG5G2810' => 'aar', 'Aa31LG8G15750' => 'aar', 'Aa31sc20G130' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_362.2422' => 'aag', 'Actinidia03875' => 'ach', 'Actinidia03953' => 'ach', 'Actinidia03983' => 'ach', 'Actinidia05583' => 'ach', 'Actinidia08439' => 'ach', 'Actinidia09706' => 'ach', 'Actinidia19048' => 'ach', 'Actinidia37754' => 'ach', 'Actinidia39299' => 'ach', 'Ah.02g115180' => 'amhyb', 'Ah.02g125090' => 'amhyb', 'Ah.06g186840' => 'amhyb', 'Ah.09g235240' => 'amhyb', 'Ah.12g059300' => 'amhyb', 'Ah.13g070640' => 'amhyb', 'AL1G18990' => 'aly', 'AL1G22270' => 'aly', 'AL2G15020' => 'aly', 'AL3G13660' => 'aly', 'AL3G23380' => 'aly', 'AL3G51530' => 'aly', 'AL5G33060' => 'aly', 'AL6G18460' => 'aly', 'AL6G49590' => 'aly', 'Aqoxy1G00562' => 'aox', 'Aqoxy1G00637' => 'aox', 'Aqoxy1G02753' => 'aox', 'Aqoxy2G00624' => 'aox', 'Aqoxy4G01978' => 'aox', 'Aqoxy6G01116' => 'aox', 'Aqoxy6G01140' => 'aox', 'arahy.Tifrunner.gnm1.ann1.011VCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.55IZK7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.677K9W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8MH36V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.A1XPM1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F2MSTS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G2H5J3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.GPJZ8X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IYQQ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J5SZ1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JH71K5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4VY4I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L7SKSM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LWR4SS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NX6A0A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Q9S7W6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S1DZ03' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SNC74A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SR9RXI' => 'arhy', 'AT1G08560' => 'ath', 'AT1G11250' => 'ath', 'AT1G61290' => 'ath', 'AT2G18260' => 'ath', 'AT3G03800' => 'ath', 'AT3G11820' => 'ath', 'AT3G52400' => 'ath', 'AT4G03330' => 'ath', 'AT5G08080' => 'ath', 'ATR0057G107' => 'atr', 'ATR0332G042' => 'atr', 'ATR0568G018' => 'atr', 'ATR0661G536' => 'atr', 'ATR0697G086' => 'atr', 'ATR0697G208' => 'atr', 'ATR0796G247' => 'atr', 'ATR0824G220' => 'atr', 'Atru.chr10.1997' => 'acertr', 'Atru.chr10.1998' => 'acertr', 'Atru.chr2.1255' => 'acertr', 'Atru.chr2.1257' => 'acertr', 'Atru.chr3.606' => 'acertr', 'Atru.chr5.3036' => 'acertr', 'Atru.chr6.3060' => 'acertr', 'Atru.chr6.3061' => 'acertr', 'Atru.chr6.3162' => 'acertr', 'Atru.chr8.1331' => 'acertr', 'AUR62004069' => 'cqu', 'AUR62006025' => 'cqu', 'AUR62007582' => 'cqu', 'AUR62012655' => 'cqu', 'AUR62021997' => 'cqu', 'AUR62030715' => 'cqu', 'AUR62030716' => 'cqu', 'AUR62032508' => 'cqu', 'AUR62035601' => 'cqu', 'AUR62036289' => 'cqu', 'AUR62036357' => 'cqu', 'AUR62036358' => 'cqu', 'AUR62037380' => 'cqu', 'AUR62037611' => 'cqu', 'AUR62039738' => 'cqu', 'AUR62044746' => 'cqu', 'BcaB01g01954' => 'bca', 'BcaB01g05636' => 'bca', 'BcaB01g05679' => 'bca', 'BcaB02g08572' => 'bca', 'BcaB03g13268' => 'bca', 'BcaB03g13325' => 'bca', 'BcaB03g16616' => 'bca', 'BcaB04g18662' => 'bca', 'BcaB05g21581' => 'bca', 'BcaB06g25573' => 'bca', 'BcaB06g25579' => 'bca', 'BcaB06g25581' => 'bca', 'BcaB07g31676' => 'bca', 'BcaB07g34099' => 'bca', 'BcaB08g34802' => 'bca', 'BcaB08g37290' => 'bca', 'BcaB08g37293' => 'bca', 'BcaB08g37385' => 'bca', 'BcaB08g37386' => 'bca', 'BcaC01g04084' => 'bca', 'BcaC01g05767' => 'bca', 'BcaC02g09260' => 'bca', 'BcaC03g13206' => 'bca', 'BcaC04g23977' => 'bca', 'BcaC05g24987' => 'bca', 'BcaC05g25000' => 'bca', 'BcaC05g29322' => 'bca', 'BcaC05g29905' => 'bca', 'BcaC05g30249' => 'bca', 'BcaC05g30285' => 'bca', 'BcaC05g30286' => 'bca', 'BcaC06g32909' => 'bca', 'BcaC06g32910' => 'bca', 'BcaC06g33386' => 'bca', 'BcaC06g36392' => 'bca', 'BcaC06g36394' => 'bca', 'BcaC07g38401' => 'bca', 'BcaC07g38646' => 'bca', 'BcaC07g41794' => 'bca', 'BcaC09g47752' => 'bca', 'BcaNung04469' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p00400' => 'bna', 'BolC1t05805H' => 'bol', 'BolC3t16780H' => 'bol', 'BolC3t18167H' => 'bol', 'BolC4t25643H' => 'bol', 'BolC5t29426H' => 'bol', 'BolC5t29693H' => 'bol', 'BolC5t34276H' => 'bol', 'BolC5t34980H' => 'bol', 'BolC7t40860H' => 'bol', 'BolC7t45210H' => 'bol', 'BolC8t48836H' => 'bol', 'BolC8t49056H' => 'bol', 'BolC8t52369H' => 'bol', 'BolC9t53198H' => 'bol', 'BraA01t04555Z' => 'bra', 'BraA03t12890Z' => 'bra', 'BraA03t13986Z' => 'bra', 'BraA04t16400Z' => 'bra', 'BraA05t22551Z' => 'bra', 'BraA06t23763Z' => 'bra', 'BraA06t23990Z' => 'bra', 'BraA06t26261Z' => 'bra', 'BraA07t28040Z' => 'bra', 'BraA08t35274Z' => 'bra', 'BraA08t35417Z' => 'bra', 'BraA09t35676Z' => 'bra', 'BraA09t35910Z' => 'bra', 'BraA09t41799Z' => 'bra', 'BraSC76t46621Z' => 'bra', 'C02p03400' => 'bna', 'C03p04040' => 'bna', 'C03p45160' => 'bna', 'C03p59060' => 'bna', 'C04p40620' => 'bna', 'C05p06660' => 'bna', 'C05p09510' => 'bna', 'C05p56090' => 'bna', 'C05p63180' => 'bna', 'C07p04590' => 'bna', 'C07p46940' => 'bna', 'C08p11570' => 'bna', 'C08p14180' => 'bna', 'C08p48300' => 'bna', 'C09p00010' => 'bna', 'C09p02720' => 'bna', 'CAN.G1058.4' => 'can', 'CAN.G118.5' => 'can', 'CAN.G1182.2' => 'can', 'CAN.G128.156' => 'can', 'CAN.G1645.3' => 'can', 'CAN.G168.23' => 'can', 'CAN.G358.64' => 'can', 'CAN.G643.7' => 'can', 'CAN.G674.3' => 'can', 'CAN.G841.15' => 'can', 'CAN.G911.39' => 'can', 'CAN.G921.15' => 'can', 'CAN.G980.15' => 'can', 'CANSAT56G1978' => 'cansat', 'CANSAT64G2584' => 'cansat', 'CANSAT64G2598' => 'cansat', 'CANSAT78G1369' => 'cansat', 'CANSAT78G1846' => 'cansat', 'CARHR008460' => 'chi', 'CARHR011480' => 'chi', 'CARHR051320' => 'chi', 'CARHR053400' => 'chi', 'CARHR077870' => 'chi', 'CARHR086370' => 'chi', 'CARHR108860' => 'chi', 'CARHR162170' => 'chi', 'CARHR205100' => 'chi', 'CARHR251760' => 'chi', 'Carub.0001s0792' => 'cru', 'Carub.0001s1083' => 'cru', 'Carub.0003s0297' => 'cru', 'Carub.0003s1117' => 'cru', 'Carub.0003s3244' => 'cru', 'Carub.0005s1876' => 'cru', 'Carub.0006s0697' => 'cru', 'Carub.0006s3374' => 'cru', 'Ca_00266_v3' => 'car', 'Ca_01592_v3' => 'car', 'Ca_04479_v3' => 'car', 'Ca_06696_v3' => 'car', 'Ca_11678_v3' => 'car', 'Ca_11679_v3' => 'car', 'Ca_18490_v3' => 'car', 'Ca_24862_v3' => 'car', 'Ca_29543_v3' => 'car', 'CBR_g34586' => 'cbr', 'CBR_g34724' => 'cbr', 'Cc02_g12540' => 'ccan', 'Cc02_g17400' => 'ccan', 'Cc03_g04960' => 'ccan', 'Cc05_g04930' => 'ccan', 'Cc05_g06440' => 'ccan', 'Cc06_g06680' => 'ccan', 'Cc06_g07150' => 'ccan', 'Cc06_g07160' => 'ccan', 'Cc07_g09710' => 'ccan', 'CDE04G3452' => 'cde', 'CDE05G2412' => 'cde', 'CDE10G0198' => 'cde', 'CDE11G0479' => 'cde', 'CDE12G0469' => 'cde', 'CDE12G0886' => 'cde', 'Cfa000361' => 'cfa', 'Cfa004985' => 'cfa', 'Cfa020047' => 'cfa', 'Cfa020048' => 'cfa', 'Cfa020049' => 'cfa', 'Cfa021585' => 'cfa', 'Ciclev10012164m.g' => 'ccl', 'Ciclev10016039m.g' => 'ccl', 'Ciclev10016060m.g' => 'ccl', 'Ciclev10017913m.g' => 'ccl', 'Ciclev10021255m.g' => 'ccl', 'Ciclev10021315m.g' => 'ccl', 'Ciclev10027293m.g' => 'ccl', 'Ciclev10029801m.g' => 'ccl', 'Ciclev10029931m.g' => 'ccl', 'CiPaw.03G161800' => 'cil', 'CiPaw.06G134500' => 'cil', 'CiPaw.09G021600' => 'cil', 'CiPaw.10G018700' => 'cil', 'CiPaw.10G119200' => 'cil', 'CiPaw.10G126600' => 'cil', 'ClCG01G015040' => 'cla', 'ClCG02G008510' => 'cla', 'ClCG02G008540' => 'cla', 'ClCG03G005560' => 'cla', 'ClCG04G005230' => 'cla', 'ClCG10G013540' => 'cla', 'ClCG10G018250' => 'cla', 'COL.COLO4_20559' => 'col', 'COL.COLO4_25950' => 'col', 'COL.COLO4_27679' => 'col', 'COL.COLO4_31571' => 'col', 'COL.COLO4_32993' => 'col', 'Cpa.g.sc104.12' => 'cpa', 'Cpa.g.sc27.114' => 'cpa', 'Cpa.g.sc3885.2' => 'cpa', 'Cpa.g.sc51.144' => 'cpa', 'Cpa.g.sc51.79' => 'cpa', 'Cpa.g.sc6.136' => 'cpa', 'Cpa.g.sc8.224' => 'cpa', 'Cre13.g588550' => 'cre', 'CsaV3_1G011820' => 'csa', 'CsaV3_2G035100' => 'csa', 'CsaV3_2G035110' => 'csa', 'CsaV3_3G038070' => 'csa', 'CsaV3_3G043100' => 'csa', 'CsaV3_4G013350' => 'csa', 'CsaV3_6G041140' => 'csa', 'CsaV3_6G041150' => 'csa', 'CsaV3_6G046340' => 'csa', 'CSS0012390' => 'camsi', 'CSS0014651' => 'camsi', 'CSS0017653' => 'camsi', 'CSS0019431' => 'camsi', 'CSS0019476' => 'camsi', 'CSS0039477' => 'camsi', 'CSS0044522' => 'camsi', 'CSS0046361' => 'camsi', 'CSS0049629' => 'camsi', 'DCAR_009730' => 'dca', 'DCAR_012949' => 'dca', 'DCAR_013472' => 'dca', 'DCAR_016914' => 'dca', 'DCAR_017301' => 'dca', 'DCAR_019284' => 'dca', 'DCAR_020692' => 'dca', 'DCAR_021227' => 'dca', 'DCAR_024230' => 'dca', 'DCAR_025951' => 'dca', 'DCAR_027283' => 'dca', 'Dinv02737' => 'din', 'Dinv11920' => 'din', 'Dinv12348' => 'din', 'Dinv13510' => 'din', 'Dinv15478' => 'din', 'Dinv23507' => 'din', 'Dinv25094' => 'din', 'Dinv29902' => 'din', 'Dinv31775' => 'din', 'Dinv39695' => 'din', 'Dinv44641' => 'din', 'Duzib093G1305' => 'dzi', 'Duzib106G0104' => 'dzi', 'Duzib106G0109' => 'dzi', 'Duzib128G0276' => 'dzi', 'Duzib128G0774' => 'dzi', 'Duzib128G2030' => 'dzi', 'Duzib160G0861' => 'dzi', 'Duzib177G0031' => 'dzi', 'Duzib177G0386' => 'dzi', 'Duzib187G0814' => 'dzi', 'Duzib192G0812' => 'dzi', 'Duzib235G0920' => 'dzi', 'Duzib248G0786' => 'dzi', 'Duzib251G0466' => 'dzi', 'Duzib268G0711' => 'dzi', 'ECA233G2084' => 'eca', 'ECA233G4199' => 'eca', 'ECA233G5824' => 'eca', 'ECA233G6221' => 'eca', 'ECA234G0295' => 'eca', 'ECA238G2892' => 'eca', 'ECA240G1181' => 'eca', 'ECA246G0759' => 'eca', 'ECA246G0999' => 'eca', 'ECA248G3176' => 'eca', 'ECA248G3653' => 'eca', 'EL10Ac3g05176' => 'bvu', 'EL10Ac3g05204' => 'bvu', 'EL10Ac5g11775' => 'bvu', 'EL10Ac5g11859' => 'bvu', 'EL10Ac6g15544' => 'bvu', 'EL10Ac8g20001' => 'bvu', 'EL10Ac9g20672' => 'bvu', 'EL10Ac9g20673' => 'bvu', 'EL10Ac9g20674' => 'bvu', 'Eucgr.A02112' => 'egr', 'Eucgr.A02572' => 'egr', 'Eucgr.A02574' => 'egr', 'Eucgr.D00709' => 'egr', 'Eucgr.E03461' => 'egr', 'Eucgr.I02426' => 'egr', 'Eucgr.K00801' => 'egr', 'Eucgr.K01922' => 'egr', 'Eucgr.K03469' => 'egr', 'FAN02G0103' => 'fan', 'FAN02G1213' => 'fan', 'FAN02G2226' => 'fan', 'FAN02G2554' => 'fan', 'FAN03G0691' => 'fan', 'FAN05G0174' => 'fan', 'FAN05G0629' => 'fan', 'FAN05G0648' => 'fan', 'FAN05G0846' => 'fan', 'FAN05G0892' => 'fan', 'FAN05G0922' => 'fan', 'FAN05G1957' => 'fan', 'FAN06G0573' => 'fan', 'FAN09G0677' => 'fan', 'FAN09G1967' => 'fan', 'FAN09G3816' => 'fan', 'FAN09G4391' => 'fan', 'FAN09G4821' => 'fan', 'FAN10G4008' => 'fan', 'FAN11G2567' => 'fan', 'FAN14G0016' => 'fan', 'FAN14G0852' => 'fan', 'FAN14G3210' => 'fan', 'FAN14G5812' => 'fan', 'FAN15G1478' => 'fan', 'FAN16G2324' => 'fan', 'FAN19G2281' => 'fan', 'FAN19G2526' => 'fan', 'FAN20G1231' => 'fan', 'FAN21G2020' => 'fan', 'FAN23G0709' => 'fan', 'FAN23G2283' => 'fan', 'FAN25G3045' => 'fan', 'FAN26G0245' => 'fan', 'FAN26G1109' => 'fan', 'FAN28G0396' => 'fan', 'FvH4_1g13020' => 'fve', 'FvH4_1g28350' => 'fve', 'FvH4_2g09080' => 'fve', 'FvH4_3g04130' => 'fve', 'FvH4_6g20460' => 'fve', 'FvH4_6g20470' => 'fve', 'FvH4_6g43430' => 'fve', 'FvH4_6g44820' => 'fve', 'FvH4_7g04270' => 'fve', 'Glyma.01G173100' => 'gma', 'Glyma.02G069700' => 'gma', 'Glyma.02G072900' => 'gma', 'Glyma.02G195300' => 'gma', 'Glyma.02G195400' => 'gma', 'Glyma.03G202800' => 'gma', 'Glyma.08G058300' => 'gma', 'Glyma.10G082400' => 'gma', 'Glyma.10G082500' => 'gma', 'Glyma.11G070000' => 'gma', 'Glyma.12G194800' => 'gma', 'Glyma.12G194900' => 'gma', 'Glyma.13G245800' => 'gma', 'Glyma.13G307600' => 'gma', 'Glyma.15G068000' => 'gma', 'Glyma.16G151200' => 'gma', 'Glyma.16G154200' => 'gma', 'Glyma.19G200500' => 'gma', 'Gohir.A01G135200' => 'ghi', 'Gohir.A03G109700' => 'ghi', 'Gohir.A04G055000' => 'ghi', 'Gohir.A06G209200' => 'ghi', 'Gohir.A08G218900' => 'ghi', 'Gohir.A09G133500' => 'ghi', 'Gohir.A10G020400' => 'ghi', 'Gohir.A11G043200' => 'ghi', 'Gohir.A11G233500' => 'ghi', 'Gohir.A13G093500' => 'ghi', 'Gohir.A13G102200' => 'ghi', 'Gohir.A13G167000' => 'ghi', 'Gohir.D01G122400' => 'ghi', 'Gohir.D02G134500' => 'ghi', 'Gohir.D04G092500' => 'ghi', 'Gohir.D06G211800' => 'ghi', 'Gohir.D08G236000' => 'ghi', 'Gohir.D09G129700' => 'ghi', 'Gohir.D10G021200' => 'ghi', 'Gohir.D11G046700' => 'ghi', 'Gohir.D11G244700' => 'ghi', 'Gohir.D12G140801' => 'ghi', 'Gohir.D13G087400' => 'ghi', 'Gohir.D13G105401' => 'ghi', 'Gohir.D13G105501' => 'ghi', 'Gohir.D13G170500' => 'ghi', 'Gorai.002G153300' => 'gra', 'Gorai.004G250800' => 'gra', 'Gorai.005G150400' => 'gra', 'Gorai.006G148600' => 'gra', 'Gorai.007G050200' => 'gra', 'Gorai.007G260300' => 'gra', 'Gorai.008G152200' => 'gra', 'Gorai.009G394100' => 'gra', 'Gorai.010G254400' => 'gra', 'Gorai.011G022300' => 'gra', 'Gorai.013G099700' => 'gra', 'Gorai.013G118200' => 'gra', 'Gorai.013G191400' => 'gra', 'GSVIVG01006716001' => 'vvi', 'GSVIVG01018937001' => 'vvi', 'GSVIVG01022480001' => 'vvi', 'GSVIVG01023788001' => 'vvi', 'GSVIVG01026367001' => 'vvi', 'GSVIVG01030578001' => 'vvi', 'GSVIVG01030607001' => 'vvi', 'GSVIVG01035559001' => 'vvi', 'HanXRQChr01g0026321' => 'han', 'HanXRQChr02g0053281' => 'han', 'HanXRQChr03g0092351' => 'han', 'HanXRQChr05g0132561' => 'han', 'HanXRQChr10g0291621' => 'han', 'HanXRQChr10g0297071' => 'han', 'HanXRQChr11g0347151' => 'han', 'HanXRQChr11g0347181' => 'han', 'HanXRQChr11g0347901' => 'han', 'HanXRQChr13g0398801' => 'han', 'HanXRQChr13g0424441' => 'han', 'HanXRQChr16g0530631' => 'han', 'HanXRQChr17g0542501' => 'han', 'HanXRQChr17g0554271' => 'han', 'Haze_02404' => 'cav', 'Haze_06564' => 'cav', 'Haze_12886' => 'cav', 'Haze_19390' => 'cav', 'Haze_20152' => 'cav', 'Haze_20153' => 'cav', 'Haze_20482' => 'cav', 'Hma1.2p1_0064F.1_g034590' => 'hma', 'Hma1.2p1_0079F.1_g041740' => 'hma', 'Hma1.2p1_0127F.1_g059510' => 'hma', 'Hma1.2p1_0225F.1_g094700' => 'hma', 'Hma1.2p1_0249F.1_g102380' => 'hma', 'Hma1.2p1_0308F.1_g120295' => 'hma', 'Hma1.2p1_0543F.1_g175430' => 'hma', 'Hma1.2p1_0650F.1_g195530' => 'hma', 'Hma1.2p1_0726F.1_g208910' => 'hma', 'Hma1.2p1_0789F.1_g218260' => 'hma', 'Hma1.2p1_1689F.1_g297690' => 'hma', 'Hma1.2p1_2172F.1_g316000' => 'hma', 'HPP92_000857' => 'vpl', 'HPP92_001212' => 'vpl', 'HPP92_001785' => 'vpl', 'HPP92_001958' => 'vpl', 'HPP92_001959' => 'vpl', 'HPP92_007674' => 'vpl', 'HPP92_010109' => 'vpl', 'HPP92_012177' => 'vpl', 'HPP92_013929' => 'vpl', 'HPP92_015640' => 'vpl', 'HPP92_015648' => 'vpl', 'HPP92_017611' => 'vpl', 'HPP92_017664' => 'vpl', 'HPP92_017996' => 'vpl', 'HPP92_018621' => 'vpl', 'HPP92_018649' => 'vpl', 'HPP92_019335' => 'vpl', 'HPP92_026693' => 'vpl', 'Hund09699' => 'sun', 'Hund10804' => 'sun', 'Hund10859' => 'sun', 'Hund13989' => 'sun', 'Hund14964' => 'sun', 'Hund15045' => 'sun', 'Hund21038' => 'sun', 'Hund24298' => 'sun', 'Lalb_Chr02g0154411' => 'lal', 'Lalb_Chr02g0157001' => 'lal', 'Lalb_Chr02g0157211' => 'lal', 'Lalb_Chr06g0174021' => 'lal', 'Lalb_Chr06g0174031' => 'lal', 'Lalb_Chr09g0322221' => 'lal', 'Lalb_Chr14g0375751' => 'lal', 'Lalb_Chr15g0090091' => 'lal', 'Lalb_Chr16g0377741' => 'lal', 'Lalb_Chr18g0059901' => 'lal', 'Lalb_Chr20g0111321' => 'lal', 'Lalb_Chr20g0122241' => 'lal', 'Lalb_Chr21g0316041' => 'lal', 'Lalb_Chr21g0317091' => 'lal', 'Lalb_Chr24g0393111' => 'lal', 'Lalb_Chr25g0287951' => 'lal', 'Lj1A1066G51' => 'lonja', 'Lj1A757T34' => 'lonja', 'Lj1P1056T19' => 'lonja', 'Lj2C418T15' => 'lonja', 'Lj2C418T16' => 'lonja', 'Lj2g0014174' => 'lja', 'Lj2g0023864' => 'lja', 'Lj2g0024517' => 'lja', 'Lj2P453T36' => 'lonja', 'Lj2P454T47' => 'lonja', 'Lj3A794T30' => 'lonja', 'Lj3g0005459' => 'lja', 'Lj4g0006949' => 'lja', 'Lj5g0002353' => 'lja', 'Lj5g0025575' => 'lja', 'Lj6g0026403' => 'lja', 'Lj8P116T43' => 'lonja', 'Lj9C374T21' => 'lonja', 'Lsat_1_v5_gn_1_58340' => 'lsa', 'Lsat_1_v5_gn_2_54080' => 'lsa', 'Lsat_1_v5_gn_3_123380' => 'lsa', 'Lsat_1_v5_gn_3_39221' => 'lsa', 'Lsat_1_v5_gn_3_76040' => 'lsa', 'Lsat_1_v5_gn_4_70360' => 'lsa', 'Lsat_1_v5_gn_6_31881' => 'lsa', 'Lsat_1_v5_gn_6_33900' => 'lsa', 'Lsat_1_v5_gn_8_128461' => 'lsa', 'Lsat_1_v5_gn_8_131781' => 'lsa', 'Lsat_1_v5_gn_9_39661' => 'lsa', 'Manes.01G136800' => 'mes', 'Manes.08G034400' => 'mes', 'Manes.08G145800' => 'mes', 'Manes.08G147400' => 'mes', 'Manes.09G044600' => 'mes', 'Manes.09G139600' => 'mes', 'Manes.09G144500' => 'mes', 'Manes.11G086000' => 'mes', 'Manes.12G075900' => 'mes', 'Manes.16G021400' => 'mes', 'Mapoly0009s0005' => 'mpo', 'Mapoly0055s0091' => 'mpo', 'Mapoly0062s0097' => 'mpo', 'Mapoly0101s0013' => 'mpo', 'Mapoly0163s0015' => 'mpo', 'MBI02_g10108_MAGBIO' => 'mbi', 'MBI02_g10109_MAGBIO' => 'mbi', 'MBI02_g23405_MAGBIO' => 'mbi', 'MBI07_g11493_MAGBIO' => 'mbi', 'MBI10_g04865_MAGBIO' => 'mbi', 'MBI11_g15513_MAGBIO' => 'mbi', 'MBI11_g15514_MAGBIO' => 'mbi', 'MBI16_g18216_MAGBIO' => 'mbi', 'MBI17_g38208_MAGBIO' => 'mbi', 'MCO04G489' => 'mco', 'MD00G1027600' => 'mdo', 'MD02G1144800' => 'mdo', 'MD03G1031500' => 'mdo', 'MD05G1064700' => 'mdo', 'MD05G1324600' => 'mdo', 'MD09G1106600' => 'mdo', 'MD09G1106700' => 'mdo', 'MD10G1302400' => 'mdo', 'MD12G1000200' => 'mdo', 'MD12G1006500' => 'mdo', 'MD12G1041700' => 'mdo', 'MD12G1041800' => 'mdo', 'MD13G1272900' => 'mdo', 'MD14G1004100' => 'mdo', 'MD14G1040900' => 'mdo', 'MD14G1041000' => 'mdo', 'MD15G1259000' => 'mdo', 'MD17G1082900' => 'mdo', 'Medtr1g056550' => 'mtr', 'Medtr1g056560' => 'mtr', 'Medtr2g012270' => 'mtr', 'Medtr2g088700' => 'mtr', 'Medtr4g090900' => 'mtr', 'Medtr5g012010' => 'mtr', 'Medtr5g020670' => 'mtr', 'Medtr6g028140' => 'mtr', 'Medtr7g106420' => 'mtr', 'Medtr8g073900' => 'mtr', 'MELO3C002559.2' => 'cme', 'MELO3C008794.2' => 'cme', 'MELO3C009548.2' => 'cme', 'MELO3C019244.2' => 'cme', 'MELO3C024589.2' => 'cme', 'MELO3C026621.2' => 'cme', 'MELO3C034678.2' => 'cme', 'Migut.G00441' => 'egut', 'Migut.H00963' => 'egut', 'Migut.H01024' => 'egut', 'Migut.H01223' => 'egut', 'Migut.J00691' => 'egut', 'Migut.L01824' => 'egut', 'Migut.L01825' => 'egut', 'Migut.L01861' => 'egut', 'Migut.M01203' => 'egut', 'Migut.N01246' => 'egut', 'MSTRG.10425' => 'ama', 'MSTRG.14184' => 'ama', 'MSTRG.15926' => 'ama', 'MSTRG.19301' => 'ama', 'MSTRG.26566' => 'ama', 'MSTRG.27694' => 'ama', 'MSTRG.4102' => 'ama', 'MSTRG.7299' => 'ama', 'Nitab4.5_0000117g0130' => 'nta', 'Nitab4.5_0000136g0300' => 'nta', 'Nitab4.5_0000178g0230' => 'nta', 'Nitab4.5_0000302g0040' => 'nta', 'Nitab4.5_0000308g0280' => 'nta', 'Nitab4.5_0000635g0160' => 'nta', 'Nitab4.5_0000767g0090' => 'nta', 'Nitab4.5_0001176g0070' => 'nta', 'Nitab4.5_0001177g0010' => 'nta', 'Nitab4.5_0002165g0030' => 'nta', 'Nitab4.5_0003526g0050' => 'nta', 'Nitab4.5_0004216g0030' => 'nta', 'Nitab4.5_0004274g0010' => 'nta', 'Nitab4.5_0005244g0080' => 'nta', 'Nitab4.5_0005257g0050' => 'nta', 'Nitab4.5_0005939g0020' => 'nta', 'Nitab4.5_0006115g0010' => 'nta', 'Nitab4.5_0006346g0010' => 'nta', 'Nitab4.5_0006454g0030' => 'nta', 'Nitab4.5_0008653g0040' => 'nta', 'Nitab4.5_0010085g0010' => 'nta', 'Nitab4.5_0010201g0010' => 'nta', 'Nitab4.5_0014356g0010' => 'nta', 'Nn1g04723' => 'nnu', 'Nn1g04943' => 'nnu', 'Nn1g08388' => 'nnu', 'Nn2g11184' => 'nnu', 'Nn2g11211' => 'nnu', 'Nn2g14343' => 'nnu', 'Nn3g16480' => 'nnu', 'Nn3g16545' => 'nnu', 'Nn3g18136' => 'nnu', 'Nn3g19261' => 'nnu', 'Nn4g22195' => 'nnu', 'Nn4g23107' => 'nnu', 'Nn5g27630' => 'nnu', 'Nn6g32052' => 'nnu', 'Nn6g32373' => 'nnu', 'Nn6g34647' => 'nnu', 'Nn8g41279' => 'nnu', 'Oeu003585.1' => 'oeu', 'Oeu003723.1' => 'oeu', 'Oeu003855.1' => 'oeu', 'Oeu008799.1' => 'oeu', 'Oeu010542.1' => 'oeu', 'Oeu010940.1' => 'oeu', 'Oeu017718.1' => 'oeu', 'Oeu032588.1' => 'oeu', 'Oeu035598.1' => 'oeu', 'Oeu035642.1' => 'oeu', 'Oeu041298.1' => 'oeu', 'Os02g0209900' => 'osa', 'Os03g0736500' => 'osa', 'Os03g0787000' => 'osa', 'Os06g0168500' => 'osa', 'Os06g0590500' => 'osa', 'Os07g0164300' => 'osa', 'Os07g0528900' => 'osa', 'Os12g0192300' => 'osa', 'Peaxi162Scf00007g01112' => 'pax', 'Peaxi162Scf00016g00064' => 'pax', 'Peaxi162Scf00060g01215' => 'pax', 'Peaxi162Scf00061g00105' => 'pax', 'Peaxi162Scf00061g01010' => 'pax', 'Peaxi162Scf00211g00310' => 'pax', 'Peaxi162Scf00325g00079' => 'pax', 'Peaxi162Scf00485g00052' => 'pax', 'Peaxi162Scf00558g00218' => 'pax', 'Peaxi162Scf00608g00058' => 'pax', 'Peaxi162Scf00611g00052' => 'pax', 'Peaxi162Scf01845g00009' => 'pax', 'PGR004G0916' => 'pgr', 'PGR004G2450' => 'pgr', 'PGR042G1856' => 'pgr', 'PGR042G2294' => 'pgr', 'PGR044G2538' => 'pgr', 'PGR119G0121' => 'pgr', 'PGR142G0760' => 'pgr', 'PGR142G2561' => 'pgr', 'PGR142G2589' => 'pgr', 'PGSC0003DMG400000733' => 'stu', 'PGSC0003DMG400003603' => 'stu', 'PGSC0003DMG400013748' => 'stu', 'PGSC0003DMG400016283' => 'stu', 'PGSC0003DMG400021331' => 'stu', 'PGSC0003DMG400021498' => 'stu', 'PGSC0003DMG400025493' => 'stu', 'PGSC0003DMG400028128' => 'stu', 'PGSC0003DMG400028145' => 'stu', 'PGSC0003DMG401021662' => 'stu', 'Phvul.001G196300' => 'pvu', 'Phvul.001G196400' => 'pvu', 'Phvul.002G032100' => 'pvu', 'Phvul.002G222900' => 'pvu', 'Phvul.004G077900' => 'pvu', 'Phvul.004G081300' => 'pvu', 'Phvul.005G114200' => 'pvu', 'Phvul.006G191600' => 'pvu', 'Phvul.007G067400' => 'pvu', 'Phvul.007G267200' => 'pvu', 'Phvul.007G267300' => 'pvu', 'Potri.004G035400' => 'ptr', 'Potri.005G121300' => 'ptr', 'Potri.006G202200' => 'ptr', 'Potri.007G023100' => 'ptr', 'Potri.007G123000' => 'ptr', 'Potri.009G117900' => 'ptr', 'Potri.011G043700' => 'ptr', 'Potri.013G053200' => 'ptr', 'Potri.016G068600' => 'ptr', 'Potri.019G030800' => 'ptr', 'Potri.019G036700' => 'ptr', 'Pp3c14_10430' => 'ppa', 'Pp3c14_10460' => 'ppa', 'Pp3c17_14090' => 'ppa', 'Pp3c18_17330' => 'ppa', 'Pp3c19_4690' => 'ppa', 'Pp3c1_23940' => 'ppa', 'Pp3c1_23960' => 'ppa', 'Pp3c23_4510' => 'ppa', 'Pp3c24_8580' => 'ppa', 'Pp3c24_8583' => 'ppa', 'Pp3c3_13140' => 'ppa', 'Pp3c4_32180' => 'ppa', 'PRCOL_00003303' => 'pco', 'PRCOL_00005815' => 'pco', 'Prupe.3G218900' => 'ppe', 'Prupe.3G219000' => 'ppe', 'Prupe.3G232300' => 'ppe', 'Prupe.4G036000' => 'ppe', 'Prupe.7G000700' => 'ppe', 'Prupe.7G006600' => 'ppe', 'Prupe.7G093400' => 'ppe', 'Prupe.7G093500' => 'ppe', 'Prupe.7G156800' => 'ppe', 'Prupe.7G197300' => 'ppe', 'Prupe.8G094700' => 'ppe', 'Prupe.8G095300' => 'ppe', 'Psat0s1616g0120' => 'psa', 'Psat1g095320' => 'psa', 'Psat1g208200' => 'psa', 'Psat2g158400' => 'psa', 'Psat2g178840' => 'psa', 'Psat3g028840' => 'psa', 'Psat5g264800' => 'psa', 'Psat6g088840' => 'psa', 'Psat6g108120' => 'psa', 'Psat7g109560' => 'psa', 'PSO017G3263' => 'pso', 'PSO063G1017' => 'pso', 'PSO170G5722' => 'pso', 'PSO339G0412' => 'pso', 'PSO339G0493' => 'pso', 'PSO339G1637' => 'pso', 'PSO339G4408' => 'pso', 'PSO339G6081' => 'pso', 'PSO384G0837' => 'pso', 'PSO384G1559' => 'pso', 'PSO384G2000' => 'pso', 'PSO384G2584' => 'pso', 'PSO384G3197' => 'pso', 'PSO384G3868' => 'pso', 'PSO541G1577' => 'pso', 'PSO541G2309' => 'pso', 'PSO541G3610' => 'pso', 'PSO541G5906' => 'pso', 'PSO675G3574' => 'pso', 'PSO675G4737' => 'pso', 'PSO675G7830' => 'pso', 'PSO782G4686' => 'pso', 'QL01p009333' => 'qlo', 'QL06p046595' => 'qlo', 'QL07p018899' => 'qlo', 'QL07p020850' => 'qlo', 'QL07p036372' => 'qlo', 'QL08p033537' => 'qlo', 'QL08p033540' => 'qlo', 'QL11p044600' => 'qlo', 'QL12p027171' => 'qlo', 'RcHm_v2.0_Chr1g0329221' => 'rch', 'RcHm_v2.0_Chr2g0101181' => 'rch', 'RcHm_v2.0_Chr2g0159801' => 'rch', 'RcHm_v2.0_Chr2g0159811' => 'rch', 'RcHm_v2.0_Chr2g0162001' => 'rch', 'RcHm_v2.0_Chr3g0476321' => 'rch', 'RcHm_v2.0_Chr3g0476331' => 'rch', 'RcHm_v2.0_Chr3g0496741' => 'rch', 'RcHm_v2.0_Chr5g0006581' => 'rch', 'RcHm_v2.0_Chr6g0264321' => 'rch', 'RcHm_v2.0_Chr6g0264961' => 'rch', 'Rhsim02G0033500' => 'rsi', 'Rhsim03G0055600' => 'rsi', 'Rhsim03G0056600' => 'rsi', 'Rhsim03G0063900' => 'rsi', 'Rhsim04G0065700' => 'rsi', 'Rhsim06G0150400' => 'rsi', 'Rhsim06G0159300' => 'rsi', 'Rhsim06G0159400' => 'rsi', 'Rhsim11G0178700' => 'rsi', 'Rhsim13G0173700' => 'rsi', 'Rhsim13G0206600' => 'rsi', 'Sabra04G0021200' => 'sbr', 'Sabra05G0100000' => 'sbr', 'Sabra06G0155500' => 'sbr', 'Sabra07G0020100' => 'sbr', 'Sabra09G0090300' => 'sbr', 'Sabra11G0030300' => 'sbr', 'Sabra13G0048200' => 'sbr', 'Sabra16G0069600' => 'sbr', 'Sabra19G0037400' => 'sbr', 'Sabra19G0039900' => 'sbr', 'Sabra19G0048200' => 'sbr', 'SalBow1G6407' => 'sbo', 'SalBow2G0246' => 'sbo', 'SalBow3G0680' => 'sbo', 'SalBow3G1673' => 'sbo', 'Sc01g0005160' => 'sci', 'Sc01g0005450' => 'sci', 'Sc03g0003080' => 'sci', 'Sc05g0008920' => 'sci', 'Sc10g0001960' => 'sci', 'Sc13g0010130' => 'sci', 'Sc21g0002440' => 'sci', 'Sed0007283' => 'sed', 'Sed0008880' => 'sed', 'Sed0009710' => 'sed', 'Sed0012593' => 'sed', 'Sed0012645' => 'sed', 'Sed0015602' => 'sed', 'Sed0018669' => 'sed', 'Sed0018996' => 'sed', 'Sed0019057' => 'sed', 'Sed0020966' => 'sed', 'Sed0024192' => 'sed', 'SEGI_05030' => 'sgi', 'SEGI_06627' => 'sgi', 'SEGI_14835' => 'sgi', 'SEGI_19818' => 'sgi', 'SEGI_34593' => 'sgi', 'SEGI_38022' => 'sgi', 'SEGI_39480' => 'sgi', 'SGA_v2.0_scaffold112G31668' => 'sas', 'SGA_v2.0_scaffold159G37629' => 'sas', 'SGA_v2.0_scaffold184G40013' => 'sas', 'SGA_v2.0_scaffold21G09638' => 'sas', 'SGA_v2.0_scaffold392G50666' => 'sas', 'SGA_v2.0_scaffold41G15784' => 'sas', 'SGA_v2.0_scaffold54G19549' => 'sas', 'SGA_v2.0_scaffold7G03960' => 'sas', 'SHI02078' => 'shi', 'SHI12402' => 'shi', 'SHI14948' => 'shi', 'SHI22982' => 'shi', 'SMO115G0331' => 'smo', 'SMO174G0246' => 'smo', 'SMO174G0267' => 'smo', 'SMO276G0011' => 'smo', 'SMO301G0081' => 'smo', 'SMO348G0035' => 'smo', 'SMO367G0313' => 'smo', 'Solyc01g006950.3' => 'sly', 'Solyc01g056810.4' => 'sly', 'Solyc01g056830.3' => 'sly', 'Solyc01g109750.2' => 'sly', 'Solyc02g085090.1' => 'sly', 'Solyc06g053760.3' => 'sly', 'Solyc07g052470.3' => 'sly', 'Solyc10g008570.3' => 'sly', 'Solyc10g081580.3' => 'sly', 'Solyc10g081850.3' => 'sly', 'Solyc12g005580.2' => 'sly', 'Sopen01g002940' => 'spe', 'Sopen01g025910' => 'spe', 'Sopen01g051940' => 'spe', 'Sopen02g029780' => 'spe', 'Sopen06g018880' => 'spe', 'Sopen07g026100' => 'spe', 'Sopen10g004390' => 'spe', 'Sopen10g032090' => 'spe', 'Sopen10g032370' => 'spe', 'Sopen12g001530' => 'spe', 'Sp1g07220' => 'spa', 'Sp1g09910' => 'spa', 'Sp2g03190' => 'spa', 'Sp3g02780' => 'spa', 'Sp3g10050' => 'spa', 'Sp3g31680' => 'spa', 'Sp5g09890' => 'spa', 'Sp6g03360' => 'spa', 'Sp6g34870' => 'spa', 'TAR169G0001' => 'tar', 'TAR169G0002' => 'tar', 'TAR258G0001' => 'tar', 'TAR369G0589' => 'tar', 'TAR381G0129' => 'tar', 'TAR623G0515' => 'tar', 'TAR623G1360' => 'tar', 'TAR624G1324' => 'tar', 'TAR625G0261' => 'tar', 'TAR626G1317' => 'tar', 'TAR627G1162' => 'tar', 'TAR629G1445' => 'tar', 'TAR633G0022' => 'tar', 'TAR633G0936' => 'tar', 'TAR633G2291' => 'tar', 'TAR636G1276' => 'tar', 'THA.LOC104801185' => 'tha', 'THA.LOC104805769' => 'tha', 'THA.LOC104805796' => 'tha', 'THA.LOC104807460' => 'tha', 'THA.LOC104809548' => 'tha', 'THA.LOC104816095' => 'tha', 'THA.LOC104816639' => 'tha', 'THA.LOC104820781' => 'tha', 'THA.LOC104824430' => 'tha', 'THA.LOC104826790' => 'tha', 'Thecc.01G032900' => 'tca', 'Thecc.02G172600' => 'tca', 'Thecc.02G312500' => 'tca', 'Thecc.05G106300' => 'tca', 'Thecc.05G247500' => 'tca', 'Thecc.05G259700' => 'tca', 'Thecc.06G197800' => 'tca', 'Thhalv10008289m.g' => 'esa', 'Thhalv10008327m.g' => 'esa', 'Thhalv10010514m.g' => 'esa', 'Thhalv10014211m.g' => 'esa', 'Thhalv10021072m.g' => 'esa', 'Thhalv10021203m.g' => 'esa', 'Thhalv10022793m.g' => 'esa', 'Thhalv10022982m.g' => 'esa', 'Thhalv10023607m.g' => 'esa', 'Thhalv10028836m.g' => 'esa', 'TPR.G2376' => 'tpr', 'TPR.G25910' => 'tpr', 'TPR.G2788' => 'tpr', 'TPR.G2816' => 'tpr', 'TPR.G31288' => 'tpr', 'TPR.G32402' => 'tpr', 'TPR.G36774' => 'tpr', 'TPR.G4177' => 'tpr', 'TPR.G9145' => 'tpr', 'TPR.G9149' => 'tpr', 'TWI09G0127' => 'twi', 'TWI32G0387' => 'twi', 'TWI32G0982' => 'twi', 'TWI38G0252' => 'twi', 'TWI38G2346' => 'twi', 'TWI60G0321' => 'twi', 'TWI60G1190' => 'twi', 'TWI73G1112' => 'twi', 'TWI74G0073' => 'twi', 'TWI75G1345' => 'twi', 'TWI77G0201' => 'twi', 'TWI79G1067' => 'twi', 'unitig_22.g5141' => 'ugi', 'unitig_22.g6862' => 'ugi', 'unitig_578.g15813' => 'ugi', 'unitig_578.g16709' => 'ugi', 'unitig_578.g16777' => 'ugi', 'unitig_699.g19879' => 'ugi', 'unitig_744.g23973' => 'ugi', 'unitig_748.g7572' => 'ugi', 'unitig_8.g3434' => 'ugi', 'unitig_85.g27221' => 'ugi', 'vmacro03827' => 'vma', 'vmacro07484' => 'vma', 'vmacro07537' => 'vma', 'vmacro09264' => 'vma', 'vmacro12221' => 'vma', 'vmacro15412' => 'vma', 'VMungo0251G3594' => 'vmu', 'VMungo0331G1488' => 'vmu', 'VMungo0464G1092' => 'vmu', 'VMungo0464G1122' => 'vmu', 'VMungo0540G0567' => 'vmu', 'VMungo0720G0091' => 'vmu', 'VMungo1080G0466' => 'vmu', 'VMungo1215G1439' => 'vmu', 'VMungo1383G0043' => 'vmu', 'VMungo1383G0170' => 'vmu', 'VMungo1383G1161' => 'vmu', 'Zm00001eb056410' => 'zma', 'Zm00001eb117190' => 'zma', 'Zm00001eb137880' => 'zma', 'Zm00001eb205380' => 'zma', 'Zm00001eb213350' => 'zma', 'Zm00001eb213360' => 'zma', 'Zm00001eb213370' => 'zma', 'Zm00001eb215350' => 'zma', 'Zm00001eb264830' => 'zma', 'Zm00001eb277080' => 'zma', 'Zm00001eb300720' => 'zma', 'Zm00001eb323060' => 'zma', 'Zm00001eb386140' => 'zma' ) $gf_id = 'HOM05D000492' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000492' ) $data_identifier = 'HOM05D000492' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 9, 'aag' => (int) 1, 'ach' => (int) 9, 'amhyb' => (int) 6, 'aly' => (int) 9, 'aox' => (int) 7, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 8, 'acertr' => (int) 10, 'cqu' => (int) 16, 'bca' => (int) 41, 'bol' => (int) 14, 'bra' => (int) 15, 'can' => (int) 13, 'cansat' => (int) 5, 'chi' => (int) 10, 'cru' => (int) 8, 'car' => (int) 9, 'cbr' => (int) 2, 'ccan' => (int) 9, 'cde' => (int) 6, 'cfa' => (int) 6, 'ccl' => (int) 9, 'cil' => (int) 6, 'cla' => (int) 7, 'col' => (int) 5, 'cpa' => (int) 7, 'cre' => (int) 1, 'csa' => (int) 9, 'camsi' => (int) 9, 'dca' => (int) 11, 'din' => (int) 11, 'dzi' => (int) 15, 'eca' => (int) 11, 'bvu' => (int) 9, 'egr' => (int) 9, 'fan' => (int) 36, 'fve' => (int) 9, 'gma' => (int) 18, 'ghi' => (int) 26, 'gra' => (int) 13, 'vvi' => (int) 8, 'han' => (int) 14, 'cav' => (int) 7, 'hma' => (int) 12, 'vpl' => (int) 18, 'sun' => (int) 8, 'lal' => (int) 16, 'lonja' => (int) 10, 'lja' => (int) 8, 'lsa' => (int) 11, 'mes' => (int) 10, 'mpo' => (int) 5, 'mbi' => (int) 9, 'mco' => (int) 1, 'mdo' => (int) 18, 'mtr' => (int) 10, 'cme' => (int) 7, 'egut' => (int) 10, 'ama' => (int) 8, 'nta' => (int) 23, 'nnu' => (int) 17, 'oeu' => (int) 11, 'osa' => (int) 8, 'pax' => (int) 12, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 11, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 2, 'ppe' => (int) 12, 'psa' => (int) 10, 'pso' => (int) 22, 'qlo' => (int) 9, 'rch' => (int) 11, 'rsi' => (int) 11, 'sbr' => (int) 11, 'sbo' => (int) 4, 'sci' => (int) 7, 'sed' => (int) 11, 'sgi' => (int) 7, 'sas' => (int) 8, 'shi' => (int) 4, 'smo' => (int) 7, 'sly' => (int) 11, 'spe' => (int) 10, 'spa' => (int) 9, 'tar' => (int) 16, 'tha' => (int) 10, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 10, 'twi' => (int) 12, 'ugi' => (int) 10, 'vma' => (int) 6, 'vmu' => (int) 11, 'zma' => (int) 13 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb386140' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1